Preprints

Created 21 Oct 2026

XplainTDA: Explaining the topological structure of single-cell multi-omics data through perturbation

by Giray, I., Malagoli, G., Schmid, K., Colome-Tatche, M.

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Created 21 Oct 2026

Hybrid Semantic-Lexical Retrieval for Source-to-CDE Mapping in the NCI caDSR

by Tanis, J. H., Warzel, D. B., Khanna, R. P., Chen, Q., Yan, C., Velleleth, R., Nash, M. T., Manathara, D., Biggers, B. B., Soares, J. B., Meerzaman, D.

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Created 21 Oct 2026

multiomeR: a pipeline for reproducible analysis of large-scale single-nucleus Epi Multiome datasets

by Koefoed, T. G., He, S., Thodberg, M., Pikkupeura, L. M., Krizic, K., Kapel, B. S., Martinez, R. S., Rasmussen, S., Hansen, T.

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Created 21 Oct 2026

Cell Painting PLUS expands morphological profiling to enhance mechanistic understanding of compounds

by Wedler, M., Muino, J. M., Pahl, A., Czodrowski, P., Helmke, P. S., Ecker, G., van Kessel, H., Callegaro, G., van de Water, B., Oelgeschlaeger, M., Liu, S.

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Created 21 Oct 2026

Rev-erbα inhibits vascular calcification by repressing osteogenic reprogramming in atherosclerosis

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Created 21 Oct 2026

MRI-Trackable Mesenchymal Stem Cells for Oncolytic Therapy: A Clinically Feasible Dual-Labeling Protocol

by Ravi, H., Healey, D., Damodar, N. N., Ackerstaff, E., Gumin, J., Ledbetter, D., Lang, F. F., Shpall, E. J., Vilchez, M. M., Wang, S.-J., Quarles, C.

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Created 21 Oct 2026

The increased production of monocytes with immunosuppressive transcriptional profiles predicts the development of SIV encephalitis

by Nguyen Duc, H. D., K. Ding, A., Sumer, C. E., Autissier, P., N. Cash, M., Salemi, M., C. Williams, K., Kim, W.-K.

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Created 21 Oct 2026

Reactions to Perceiving Tangible vs Virtual Impossible objects: Investigating Dimensions of Visual Reality

by Rossetti, P. Y., Souilhol, M., Foncelle, A., El Khoury, J., Seyes, A., Quesque, F., Volland, F., Kambara, A.

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Created 21 Oct 2026

Detecting movement preparation with HYDRE: a hybrid model of temporal and spectral brain signals

by Thiboud, R., Rassoulou, F., Schwartz, D., Mouches, P., Thiboud, P.-E., Eshaan, E., Farne, A., Vernet, M.

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Created 21 Oct 2026

Selectivity Dilution in Three-Factor Learning: A Finite-Population Model with Potential Implications for Motor Development and Post-Stroke Motor Rehabilitation

by Liu, Z., Wu, C., Liu, Z., Hu, B., Mu, J.

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