Preprints

Created 08 Sep 2026

A physics-informed hybrid deep learning model for spatiotemporal rice disease prediction using multi-source data

by Jin, Z., Wang, J., Huang, W., Zhang, J., Ma, H., Salguero-Gomez, R.

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Created 08 Sep 2026

EISCA and EISTA: Full-Spectrum Pipelines for Single-Cell and Spatial Transcriptomics Analysis

by Wu, H., Lister, A., Macaulay, I. C., Long, K., Uauy, C., Lan, Y., Wickham, G. J., Swarbreck, D., Videm, P., Stubbs, A., Soranzo, N., de Waard-van Baardwijk, M., Nilchi, A. N., Papatheodorou, I.

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Created 08 Sep 2026

Parent-of-origin phasing of somatic mutations shows equal mutation burden between parental genomes in human cancers

by Lefebvre, M., Cleris, A., Parmentier, M., Van Loo, P., Detours, V., Tarabichi, M.

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Created 08 Sep 2026

Computer vision-aided locomotor behavioral analysis identifies therapeutic motor signatures in a mouse model of Huntington disease

by Du, L., Wang, Z., Wu, Q., Liu, H., Bavkar, A., Zhou, Y., Shi, Y., Lim, L. A., Guo, J., Qin, Z., Ross, C. A., Duan, W.

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Created 08 Sep 2026

OCTOPUS: A versatile open-source tool creating realistic numericalbrain cells

by Brammerloh, M., de Riedmatten, I., Beaubis, J., Nguyen-Duc, J., Oliveira, A. R., Le Boeuf Flo, A., Fischi-Gomez, E., Patino Lopez, J. R., Jelescu, I. O.

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Created 08 Sep 2026

Learning from tandem mass spectra at scale with a self-supervised foundation model for proteomics

by Nieuwoudt, M., Reverenna, M., Patel, D., Catzel, R., Houngue, I. H. J., Daniel, J., Eloff, K., Santos, A., Lopez Carranza, N., Jenkins, T. P., Van Goey, J., Kalogeropoulos, K.

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Created 08 Sep 2026

Predicting Endometriosis Status and Menstrual Cycle Phase Using DNA Methylation

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Created 08 Sep 2026

Benchmark validity in graph neural network scoring of metabolic reaction activity on Recon3D: detecting label leakage, memorized noise and input-invariant models

by Phongwattana, T., Chan, J. H.

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Created 08 Sep 2026

WGCNA+: AI-powered WGCNA for Integration of Multi-Omics Data

by Zito, A., Escriba' Montagut, X., Cano-Muniz, S., Martinelli, A., Akhmedov, M., Kwee, I. W.

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Created 08 Sep 2026

A systematic evaluation of SIRT6 as transcriptomic biomarker of aging

by Kashuk, E., Tarakanova, A., Malygina, A., Kuzovkina, N., Ponomareva, A., Toiber, D., Khrameeva, E., Smirnov, D.

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