Preprints

Created 08 Sep 2026

Parent-of-origin phasing of somatic mutations shows equal mutation burden between parental genomes in human cancers

by Lefebvre, M., Cleris, A., Parmentier, M., Van Loo, P., Detours, V., Tarabichi, M.

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Created 08 Sep 2026

Computer vision-aided locomotor behavioral analysis identifies therapeutic motor signatures in a mouse model of Huntington disease

by Du, L., Wang, Z., Wu, Q., Liu, H., Bavkar, A., Zhou, Y., Shi, Y., Lim, L. A., Guo, J., Qin, Z., Ross, C. A., Duan, W.

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Created 08 Sep 2026

OCTOPUS: A versatile open-source tool creating realistic numericalbrain cells

by Brammerloh, M., de Riedmatten, I., Beaubis, J., Nguyen-Duc, J., Oliveira, A. R., Le Boeuf Flo, A., Fischi-Gomez, E., Patino Lopez, J. R., Jelescu, I. O.

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Created 08 Sep 2026

Learning from tandem mass spectra at scale with a self-supervised foundation model for proteomics

by Nieuwoudt, M., Reverenna, M., Patel, D., Catzel, R., Houngue, I. H. J., Daniel, J., Eloff, K., Santos, A., Lopez Carranza, N., Jenkins, T. P., Van Goey, J., Kalogeropoulos, K.

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Created 08 Sep 2026

Predicting Endometriosis Status and Menstrual Cycle Phase Using DNA Methylation

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Created 08 Sep 2026

Benchmark validity in graph neural network scoring of metabolic reaction activity on Recon3D: detecting label leakage, memorized noise and input-invariant models

by Phongwattana, T., Chan, J. H.

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Created 08 Sep 2026

WGCNA+: AI-powered WGCNA for Integration of Multi-Omics Data

by Zito, A., Escriba' Montagut, X., Cano-Muniz, S., Martinelli, A., Akhmedov, M., Kwee, I. W.

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Created 08 Sep 2026

A systematic evaluation of SIRT6 as transcriptomic biomarker of aging

by Kashuk, E., Tarakanova, A., Malygina, A., Kuzovkina, N., Ponomareva, A., Toiber, D., Khrameeva, E., Smirnov, D.

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Created 08 Sep 2026

Keloid transcriptomics reveal heterogeneity in fibroblast subtype enrichment, gene expression, and immune cell responses

by Panzer, J. J., Pan, M., Nair, M., Loveless, I. M., Adrianto, I., Huang, L., Chitale, D., Francescone, R., Vendramini-Costa, D. B., de Guzman Strong, C., Levin, A. M., Jones, L. R.

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Created 08 Sep 2026

PharmCast: rapid generation of three-dimensional pharmacophore fingerprints from two-dimensional structure without conformer generation

by Muskal, S. M., McGregor, M. J.

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