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Virus induced transgene- and tissue-culture free heritable genome editing in tomato

Created on 11 Nov 2025

Authors

Jacobsen, S. E., Liu, Y., Weiss, T., Lee, J., Powell, J., Choo, S. Y. C., Roshannai, E., Kamalu, M., Amerasekera, J., Feng, S.

Abstract

Genome editing has emerged as a powerful tool for crop breeding. However, most commonly used approaches rely on tissue culture and the use of transgenic materials, which are time-consuming and labor-intensive, and often exhibit strong genotype dependency. Here we utilized tobacco rattle virus (TRV)-mediated ISYmu1 genome editing, coupled with in planta shoot regeneration, to achieve somatic and heritable genome editing in different tomato cultivars. By targeting the SlPDS gene, we successfully generated virus- and transgene-free homozygous mutant progeny in one generation. We further verified the method by generating somatic edits in SlDA1, a gene with potential agronomic relevance. Given the wide host range of TRV and its compatibility with in planta shoot regeneration, our system could be broadly applicable for rapid, non-transgenic and heritable genome editing, thereby advancing functional genomics and crop improvement.

Preprint server: bioRxiv
The authors list and abstract were imported from bioRxiv on 11 Nov 2025.

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