Authors
Charles Warden
Summary
This protocol provides detailed instructions on how to produce quality control metrics, differentially methylated CpG sites, and differentially methylated CpG islands for Illumina 450k methylation array data using theCOHCAP Bioconductor package. Scripts for comparing tools to identify differentially methylated regions are also provided, with benchmarks described in the introduction to this protocol.Further details
The protocol was published on Protocol Exchange on 30 January 2014. To see the entire protocol, click on the source link.Advertisement
Stats
- Recommendations n/a n/a positive of 0 vote(s)
- Views 371
- Comments 0