Authors
Peng Du, Rong Guo, Ya Dong Yao, Jun Min Zhu, Jian Gang Feng, Hui Sun, Jie Mao
Published in
BMC genomics. Jul 17, 2026. Epub Jul 17, 2026.
Abstract
The gut microbiota plays a pivotal role in maintaining host health by modulating metabolic pathways and immune functions. Although its biological significance is well recognized, systematic research into the functional characterization of intestinal bacteria remains scarce, particularly concerning the impact of culture environments and host cell model selection on functional assessment. This study focused on a strain of Bifidobacterium pseudocatenulatum isolated from the feces of healthy individuals. The objective was to investigate the regulatory effects of its metabolites, produced under different medium conditions, on gene expression across multiple host cell models.
Metabolomic analysis revealed that the choice of culture medium (BHI vs. GAM) significantly reshaped the metabolic profiles of B. pseudocatenulatum. Transcriptomic data demonstrated that metabolites induced by different media led to markedly distinct gene expression patterns within the same host cell line. Furthermore, even under identical metabolite exposure conditions, the four cell models (MODE-K, NCM460, Henle-407, and HEK-293T) exhibited highly divergent and cell-line-specific regulatory responses.
These findings highlight the decisive influence of both medium composition and cell model selection on the outcomes of functional studies concerning gut commensal bacteria. This research not only provides a scientific basis for optimizing experimental designs in microbial functional studies but also underscores the necessity of rigorously evaluating culture conditions and model suitability in microbiota research.
PMID:
42469641
Bibliographic data and abstract were imported from PubMed on 18 Jul 2026.
Read full publication at:
Please sign in
to see all details.
Advertisement
Stats
- Recommendations n/a n/a positive of 0 vote(s)
- Views 5
- Comments 0