Computational design of immunogenic peptide-ligand conjugates for targeted therapy against Nipah virus infection.

Authors

Sudip Prasad Jena, Prateek Nayak, M A Adithyan, Manoviraj Morey, R Vihaas Tharsini, Abilash Valsala Gopalakrishnan, Kuntal Pal, Sabina Evan Prince

Published in

Frontiers in bioinformatics. Volume 6. Pages 1846380. Epub Jul 27, 2026.

Abstract

Nipah virus (NiV) poses a major risk to global public health due to its high infectivity and associated mortality rates. Currently, no licensed vaccines or antiviral medications are available for NiV infection, leaving clinical management limited to supportive care. The viral receptor glycoprotein responsible for binding NiV to host cell receptors (ephrin-B2/B3) represents an ideal therapeutic target. This study proposes a novel peptide-ligand conjugate (PLC) immunotherapeutic approach that exploits pre-existing immune responses in NiV-endemic populations to selectively target and eliminate infected cells.
We employed biomolecular modeling (in silico) to establish binding affinities and perform docking studies using a compound library obtained from the MolProphet database. A non-cleavable oxime linker was selected to enhance physical stability and ensure robust conjugation between ligand and peptide components. The peptide was engineered to contain immunogenic minimal epitope regions derived from measles, mumps, and rubella vaccines, selected based on their high immunization rates and long-lived memory responses in individuals residing in NiV-endemic areas.
The PLC design demonstrated selective binding capacity to a transmembrane protein present on NiV-infected cells. The oxime linker provided enhanced stability, and the peptide epitope design successfully incorporated regions associated with established long-term immunity.
This PLC system represents a promising framework for antiviral therapeutic development by harnessing pre-existing immune recognition to promote selective clearance of NiV-infected cells. The findings highlight critical structural components and functional roles of PLCs in therapeutic development, including drug target screening and rational design strategies for enhancing targeting specificity and molecular stability. Future work should focus on experimental validation of the computational predictions and in vitro/in vivo efficacy studies.

PMID:
42577232
Bibliographic data and abstract were imported from PubMed on 11 Aug 2026.

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