Proteomics-based clustering for higher risk of venous thromboembolism in patients with nephrotic syndrome.

Authors

Xin Liu, Jing Ma, Yanshuang Lyu, Xiaomeng Zhang, Wanlu Song, Peiran Yang, Zhenguo Zhai, Guohui Fan, Dingyi Wang

Published in

Research and practice in thrombosis and haemostasis. Volume 10. Issue 5. Pages 106855. Epub Jul 14, 2026.

Abstract

Nephrotic syndrome (NS) carries a high and heterogeneous risk of venous thromboembolism (VTE). Hypercoagulability has been considered as key factors, but in-depth molecular mechanisms remain unrevealed.
We aimed to identify patients with NS who are under higher risk for VTE and explore key pathways and molecules using proteomic profiling.
Serum proteomic data from 49 patients with NS were analyzed via unsupervised consensus clustering (top 1000 variable proteins, K = 2) and gene set variation analysis. Differentially expressed proteins were identified, and a protein-protein interaction network was constructed to pinpoint hub proteins. The levels of hub proteins were compared between the clusters, and their correlation with clinical biomarkers of renal function were analyzed. The cumulative incidence of VTE over 2 years was the primary end point. Trajectory analysis was performed to reveal the dynamic changes of renal function of each cluster.
Unsupervised clustering stratified 2 clusters. Cluster 2 had numerically higher prevalence of both baseline and cumulative VTE than in cluster 1 (43% vs 11%; P = 0.13 for baseline VTE; and 58% vs 22%; P = .074 for cumulative VTE) and had enriched activity in extracellular matrix organization and cell-cell interaction pathways. Differentially expressed protein analysis found 145 upregulated proteins in cluster 2, and protein-protein interaction network analysis identified 9 candidate hub proteins (CTNNB1, VCAN, POSTN, SDC1, MMP2, SERPINC1, APOA1, PCSK9, and LIPC), all significantly elevated in cluster 2, and MMP2 and POSTN were associated with markers of tubular injury.
Serum proteomics analysis identified a group of patients with NS who were potentially at higher risk of developing VTE. Extracellular matrix and endothelial glycocalyx damage might play an important role in VTE development among patients with NS.

PMID:
42576899
Bibliographic data and abstract were imported from PubMed on 11 Aug 2026.

Read full publication at:
Please sign in to see all details.

Stats

1-terrible, 9-excellent. How would you rate this publication? Sign in in to submit your rating.

Post a comment

You need to be signed in to post comments. You can sign in here.

Comments

There are no comments yet.