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Sequence cluster and distal-site engineering of Fdc for efficient isobutene biosynthesis.

Created on 17 Aug 2026

Authors

Ting Feng, Xuanyu Cao, Liran Yang, Haoxian Huang, Yanbin Feng, Yunming Fang, Song Xue

Published in

Bioresource technology. Pages 135645. Aug 16, 2026. Epub Aug 16, 2026.

Abstract

Isobutene is an important platform chemical that is still predominantly produced from petroleum-derived feedstocks. The ferulic acid decarboxylase (Fdc) catalyzed decarboxylation of 3-methylcrotonic acid provides a green and sustainable route to bio-based isobutene. However, the poor activity of native Fdc toward this non-natural substrate severely limits its practical application. Here, we developed an integrated enzyme-engineering strategy that combines sequence-cluster mining with distal-site engineering to improve catalytic performance. The engineered triple-site mutant V132C/Y298F/S484A (3MUT) exhibited 5.3-fold the isobutene production of WT. Coupling this mutant with reaction-process optimization and cofactor engineering increased the isobutene yield to 67.9%, representing the highest reported yield to date. Mechanistic studies revealed that distal-site mutations in 3MUT reshaped the active site by disrupting the M293-mediated hydrogen bond that blocks the substrate to active site, then further promoting favorable hydrogen-bond interactions with the substrate via R183 and E292, respectively. These findings establish an efficient route for sustainable bio-based isobutene production and demonstrate the potential of distal-site engineering for improving UbiD-family decarboxylases.

PMID:
42604699
Bibliographic data and abstract were imported from PubMed on 17 Aug 2026.

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