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Single-Cell-Informed Characterization of A Candidate S100A9-Associated Epithelial Program and Prognostic Signature in Bladder Cancer.

Created on 15 Oct 2026

Authors

Gang Li, Jingmin Cui, Xiufang Feng, Wenhan Li, Tao Li, Peilin Chen

Published in

Archivos espanoles de urologia. Volume 79. Issue 8. Pages 1381-1394.

Abstract

Bladder cancer exhibits substantial molecular heterogeneity, and adverse epithelial programs remain incompletely characterized at single-cell resolution. This study aimed to identify candidate epithelial programs and derive genes supporting prognostic modeling.
Single-cell RNA sequencing data were analyzed to annotate epithelial subtypes and infer malignant populations. Bulk transcriptomic cohorts were used for Cox regression, risk-model construction, pathway analysis, immune characterization, and cell-cell communication inference. Stearoyl-CoA desaturase (SCD) was experimentally assessed in bladder cancer cells.
We identified 14 epithelial subtypes with cell-level differences across pathological T stages. C05 Epithelial-S100A9 showed basal-like features, proliferative signaling, and adverse program-level survival associations. GSE130001 showed broad C05-signature activity but no discrete C05-like subpopulation. From this program, we derived a four-gene signature comprising epoxide EPHX1, SCD, LDLR, and TSPAN8. High-risk tumors were enriched for epithelial-mesenchymal transition, collagen-associated pathways, immune-checkpoint expression, and fibroblast-related signaling. SCD knockdown reduced proliferation and migration.
This study characterizes a candidate S100A9-associated epithelial program and a single-cell-informed prognostic framework linked to stromal and immune features. These findings suggest potential prognostic relevance, but independent single-cell analyses, mechanistic studies, and prospective validation remain required.

PMID:
42876129
Bibliographic data and abstract were imported from PubMed on 15 Oct 2026.

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