Preprints

Created 11 Oct 2026

Winnow-tax: sensitive and precise taxonomic profiling of low-coverage organisms in shotgun metagenomes

by Sun, S., Fodor, A. A.

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Created 11 Oct 2026

Systematic benchmark of demultiplexing workflows for direct RNA sequencing

by Bryson, J. W., Johansson, L. B., George, A., Chen, J., Auxillos, J. Y., Rennie, S.

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Created 11 Oct 2026

Predicted structure of the 89-kDa invasion-tip protein of Holospora obtusa, an endonuclear symbiont of Paramecium caudatum, suggests a pH-dependent conformational change

by Takenaka, Y., Murai, T., Nakatsu, T., Shigeri, Y., Fujishima, M.

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Created 11 Oct 2026

Type 6 secretion systems of adherent-invasive Escherichia coli isolated from Crohn's disease patients shape intestinal microbiota.

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Created 11 Oct 2026

AMMPER-2: A spatially explicit agent-based model of microbial radiobiology with redox dye simulation

by Palacios, D., Lee, J., Sharma, P., Marous, M., Mejia, D., Liddell, L., Gentry, D., Santa Maria, S.

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Created 11 Oct 2026

The proteasome and ERAD pathways can regulate hepatitis E virus pORF1 proteostasis and genome replication

by Abualsaoud, K. M., Buchanan, F. J., Byford, O. M., Bartholomew, E. M., Williams, C. E., Kailani, M., Penrice-Randal, R., Harris, M., Herod, M. R.

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Created 11 Oct 2026

Staphylococcus aureus GpsB, Stk, and VraSR form a cell wall surveillance network to maintain cell envelope integrity and mediate antibiotic resistance

by McKnight, L. J., Payne, O., King, A., Carroll, J., Boyer, B., Brown, A., Hammond, L. R., Eswara, P. J.

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Created 11 Oct 2026

Non-canonical alternate interactors of SARS CoV-2 Spike protein implicated in placental susceptibilty

by Mandal, S., Majumder, S., Nandy, S. K., Mukherjee, R., Giri, K., Mukhopadhyay, A.

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Created 11 Oct 2026

RiboFlow v2: a configurable ribosome profiling pipeline reveals measurements sensitive to read-mapping methodology

by Nguyen, D., Cenik, C.

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Created 11 Oct 2026

Characterization of artificial riboswitches for Coxsackievirus B3 detection using machine learning

by Auyong, J., Long, H. A., Hu, S., Jacob, J., Chan, K., Gupta, B., Mengistu, A., Tokuhara, M., Khatib, L., Andreopoulos, W. B.

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